Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs7187431 chr16:90024900 A/G 2.22E-8 279 24.8 33.92 5.95 KM Plot
KIRP rs7188500 chr16:8714505 C/G 5.14E-5 289 25.57 32.93 5.72 KM Plot
KIRP rs7189082 chr16:8714753 G/C 5.14E-5 289 5.72 32.93 25.57 KM Plot
KIRP rs7192275 chr16:90024899 T/A 2.22E-8 279 24.8 33.92 5.95 KM Plot
KIRP rs7193436 chr16:88748736 T/C 4.33E-9 281 13 20.53 26.48 KM Plot
KIRP rs7194934 chr16:8714162 A/C 4.25E-5 283 5.72 34.3 25.55 KM Plot
KIRP rs7195689 chr16:8714620 A/G 5.14E-5 289 5.72 32.93 25.57 KM Plot
KIRP rs7197351 chr16:8709168 A/G 5.61E-5 289 5.72 31.57 25.53 KM Plot
KIRP rs7201508 chr16:88046119 G/C 3.22E-11 279 25.5 26.37 8.6 KM Plot
KIRP rs7203440 chr16:90146767 C/A 1.78E-7 279 23.97 37.6 10.7 KM Plot
KIRP rs7214017 chr17:30332220 T/C 8.49E-12 287 26.6 23.4 10.37 KM Plot
KIRP rs7215396 chr17:80755760 T/G 6.46E-9 283 25.78 28.35 16.4 KM Plot
KIRP rs7216239 chr17:79660187 C/T 1.69E-6 282 24.8 27.33 8.4 KM Plot
KIRP rs72164066 chr6:27767173 TTTTG/T 1.32E-8 288 25.6 27.78 9.77 KM Plot
KIRP rs7218196 chr17:80836281 C/T 3.12E-6 284 26.37 22.68 16.77 KM Plot